Files
DSpace/dspace-api/src/main/java/org/dspace/administer/RegistryLoader.java
Kim Shepherd fbb496e1c6 Improve help and docs for RegistryLoader
And a few other small improvements

(cherry picked from commit f1b4e6ef17)
2025-04-29 19:50:29 +00:00

354 lines
13 KiB
Java

/**
* The contents of this file are subject to the license and copyright
* detailed in the LICENSE and NOTICE files at the root of the source
* tree and available online at
*
* http://www.dspace.org/license/
*/
package org.dspace.administer;
import java.io.File;
import java.io.IOException;
import java.sql.SQLException;
import java.util.ArrayList;
import java.util.Arrays;
import javax.xml.parsers.DocumentBuilder;
import javax.xml.parsers.DocumentBuilderFactory;
import javax.xml.parsers.ParserConfigurationException;
import javax.xml.transform.TransformerException;
import javax.xml.xpath.XPath;
import javax.xml.xpath.XPathConstants;
import javax.xml.xpath.XPathExpressionException;
import javax.xml.xpath.XPathFactory;
import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.DefaultParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.commons.lang3.StringUtils;
import org.apache.logging.log4j.Logger;
import org.dspace.authorize.AuthorizeException;
import org.dspace.content.BitstreamFormat;
import org.dspace.content.factory.ContentServiceFactory;
import org.dspace.content.service.BitstreamFormatService;
import org.dspace.core.Context;
import org.dspace.core.LogHelper;
import org.w3c.dom.Document;
import org.w3c.dom.Node;
import org.w3c.dom.NodeList;
import org.xml.sax.SAXException;
/**
* Loads the bitstream format and Dublin Core type registries into the database.
* Intended for use as a command-line tool.
* <P>
* Example usage:
* <P>
* <code>RegistryLoader -bitstream bitstream-formats.xml</code>
* <P>
* <code>RegistryLoader -metadata dc-types.xml</code>
*
* @author Robert Tansley
* @version $Revision$
*/
public class RegistryLoader {
/**
* log4j category
*/
private static final Logger log = org.apache.logging.log4j.LogManager.getLogger(RegistryLoader.class);
protected static BitstreamFormatService bitstreamFormatService = ContentServiceFactory.getInstance()
.getBitstreamFormatService();
/**
* Default constructor
*/
private RegistryLoader() { }
/**
* For invoking via the command line
*
* @param argv the command line arguments given
* @throws Exception if error
*/
public static void main(String[] argv) throws Exception {
// Set up command-line options and parse arguments
CommandLineParser parser = new DefaultParser();
Options options = createCommandLineOptions();
try {
CommandLine line = parser.parse(options, argv);
// Check if help option was entered or no options provided
if (line.hasOption('h') || line.getOptions().length == 0) {
printHelp(options);
System.exit(0);
}
Context context = new Context();
// Can't update registries anonymously, so we need to turn off
// authorisation
context.turnOffAuthorisationSystem();
try {
// Work out what we're loading
if (line.hasOption('b')) {
String filename = line.getOptionValue('b');
if (StringUtils.isEmpty(filename)) {
System.err.println("No file path provided for bitstream format registry");
printHelp(options);
System.exit(1);
}
RegistryLoader.loadBitstreamFormats(context, filename);
} else if (line.hasOption('m')) {
String filename = line.getOptionValue('m');
if (StringUtils.isEmpty(filename)) {
System.err.println("No file path provided for metadata registry");
printHelp(options);
System.exit(1);
}
// Call MetadataImporter, as it handles Metadata schema updates
MetadataImporter.loadRegistry(filename, true);
} else {
System.err.println("No registry type specified");
printHelp(options);
System.exit(1);
}
// Commit changes and close Context
context.complete();
System.exit(0);
} catch (Exception e) {
log.fatal(LogHelper.getHeader(context, "error_loading_registries", ""), e);
System.err.println("Error: \n - " + e.getMessage());
System.exit(1);
} finally {
// Clean up our context, if it still exists & it was never completed
if (context != null && context.isValid()) {
context.abort();
}
}
} catch (ParseException e) {
System.err.println("Error parsing command-line arguments: " + e.getMessage());
printHelp(options);
System.exit(1);
}
}
/**
* Create the command-line options
* @return the command-line options
*/
private static Options createCommandLineOptions() {
Options options = new Options();
options.addOption("b", "bitstream", true, "load bitstream format registry from specified file");
options.addOption("m", "metadata", true, "load metadata registry from specified file");
options.addOption("h", "help", false, "print this help message");
return options;
}
/**
* Print the help message
* @param options the command-line options
*/
private static void printHelp(Options options) {
HelpFormatter formatter = new HelpFormatter();
formatter.printHelp("RegistryLoader",
"Load bitstream format or metadata registries into the database\n",
options,
"\nExamples:\n" +
" RegistryLoader -b bitstream-formats.xml\n" +
" RegistryLoader -m dc-types.xml",
true);
}
/**
* Load Bitstream Format metadata
*
* @param context DSpace context object
* @param filename the filename of the XML file to load
* @throws SQLException if database error
* @throws IOException if IO error
* @throws TransformerException if transformer error
* @throws ParserConfigurationException if config error
* @throws AuthorizeException if authorization error
* @throws SAXException if parser error
*/
public static void loadBitstreamFormats(Context context, String filename)
throws SQLException, IOException, ParserConfigurationException,
SAXException, TransformerException, AuthorizeException, XPathExpressionException {
Document document = loadXML(filename);
// Get the nodes corresponding to formats
XPath xPath = XPathFactory.newInstance().newXPath();
NodeList typeNodes = (NodeList) xPath.compile("dspace-bitstream-types/bitstream-type")
.evaluate(document, XPathConstants.NODESET);
// Add each one as a new format to the registry
for (int i = 0; i < typeNodes.getLength(); i++) {
Node n = typeNodes.item(i);
loadFormat(context, n);
}
log.info(LogHelper.getHeader(context, "load_bitstream_formats",
"number_loaded=" + typeNodes.getLength()));
}
/**
* Process a node in the bitstream format registry XML file. The node must
* be a "bitstream-type" node
*
* @param context DSpace context object
* @param node the node in the DOM tree
* @throws SQLException if database error
* @throws IOException if IO error
* @throws TransformerException if transformer error
* @throws AuthorizeException if authorization error
*/
private static void loadFormat(Context context, Node node)
throws SQLException, AuthorizeException, XPathExpressionException {
// Get the values
String mimeType = getElementData(node, "mimetype");
String shortDesc = getElementData(node, "short_description");
String desc = getElementData(node, "description");
String supportLevelString = getElementData(node, "support_level");
int supportLevel = Integer.parseInt(supportLevelString);
String internalString = getElementData(node, "internal");
boolean internal = Boolean.valueOf(internalString).booleanValue();
String[] extensions = getRepeatedElementData(node, "extension");
// Check if this format already exists in our registry (by mime type)
BitstreamFormat exists = bitstreamFormatService.findByMIMEType(context, mimeType);
// If not found by mimeType, check by short description (since this must also be unique)
if (exists == null) {
exists = bitstreamFormatService.findByShortDescription(context, shortDesc);
}
// If it doesn't exist, create it..otherwise skip it.
if (exists == null) {
// Create the format object
BitstreamFormat format = bitstreamFormatService.create(context);
// Fill it out with the values
format.setMIMEType(mimeType);
bitstreamFormatService.setShortDescription(context, format, shortDesc);
format.setDescription(desc);
format.setSupportLevel(supportLevel);
format.setInternal(internal);
ArrayList<String> extensionList = new ArrayList<>();
extensionList.addAll(Arrays.asList(extensions));
format.setExtensions(extensionList);
// Write to database
bitstreamFormatService.update(context, format);
}
}
// ===================== XML Utility Methods =========================
/**
* Load in the XML from file.
*
* @param filename the filename to load from
* @return the DOM representation of the XML file
* @throws IOException if IO error
* @throws ParserConfigurationException if config error
* @throws SAXException if parser error
*/
private static Document loadXML(String filename) throws IOException,
ParserConfigurationException, SAXException {
DocumentBuilder builder = DocumentBuilderFactory.newInstance()
.newDocumentBuilder();
return builder.parse(new File(filename));
}
/**
* Get the CDATA of a particular element. For example, if the XML document
* contains:
* <P>
* <code>
* <foo><mimetype>application/pdf</mimetype></foo>
* </code>
* passing this the <code>foo</code> node and <code>mimetype</code> will
* return <code>application/pdf</code>.
* </P>
* Why this isn't a core part of the XML API I do not know...
*
* @param parentElement the element, whose child element you want the CDATA from
* @param childName the name of the element you want the CDATA from
* @return the CDATA as a <code>String</code>
* @throws TransformerException if transformer error
*/
private static String getElementData(Node parentElement, String childName)
throws XPathExpressionException {
// Grab the child node
XPath xPath = XPathFactory.newInstance().newXPath();
Node childNode = (Node) xPath.compile(childName).evaluate(parentElement, XPathConstants.NODE);
if (childNode == null) {
// No child node, so no values
return null;
}
// Get the #text
Node dataNode = childNode.getFirstChild();
if (dataNode == null) {
return null;
}
// Get the data
String value = dataNode.getNodeValue().trim();
return value;
}
/**
* Get repeated CDATA for a particular element. For example, if the XML
* document contains:
* <P>
* <code>
* <foo>
* <bar>val1</bar>
* <bar>val2</bar>
* </foo>
* </code>
* passing this the <code>foo</code> node and <code>bar</code> will
* return <code>val1</code> and <code>val2</code>.
* </P>
* Why this also isn't a core part of the XML API I do not know...
*
* @param parentElement the element, whose child element you want the CDATA from
* @param childName the name of the element you want the CDATA from
* @return the CDATA as a <code>String</code>
* @throws TransformerException if transformer error
*/
private static String[] getRepeatedElementData(Node parentElement,
String childName) throws XPathExpressionException {
// Grab the child node
XPath xPath = XPathFactory.newInstance().newXPath();
NodeList childNodes = (NodeList) xPath.compile(childName).evaluate(parentElement, XPathConstants.NODESET);
String[] data = new String[childNodes.getLength()];
for (int i = 0; i < childNodes.getLength(); i++) {
// Get the #text node
Node dataNode = childNodes.item(i).getFirstChild();
// Get the data
data[i] = dataNode.getNodeValue().trim();
}
return data;
}
}