Add Julia

datascience-notebook/.gitignore

@@ -0,0 +1 @@
+*~

datascience-notebook/Dockerfile

@@ -10,6 +10,9 @@ RUN apt-get update && \
     gfortran \
     gcc && apt-get clean
 
+# Julia dependencies
+RUN apt-get install -y julia libnettle4 && apt-get clean
+
 
 USER jovyan
 
@@ -76,5 +79,9 @@ RUN conda install --yes \
     'r-rcurl=1.95*' \
     'r-randomforest=4.6*' && conda clean -yt
 
+# IJulia and Julia packages
+RUN julia -e 'Pkg.add("IJulia")'
+RUN julia -e 'Pkg.add("Gadfly")' && julia -e 'Pkg.add("RDatasets")'
+
 # Switch back to root so that supervisord runs under that user
 USER root

datascience-notebook/Dockerfile~

@@ -0,0 +1,80 @@
+FROM jupyter/minimal-notebook
+
+MAINTAINER Jupyter Project <jupyter@googlegroups.com>
+
+# R pre-requisites
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends \
+    libxrender1 \
+    fonts-dejavu \
+    gfortran \
+    gcc && apt-get clean
+
+
+USER jovyan
+
+
+# Install Python 3 packages
+RUN conda install --yes \
+    'pandas=0.16*' \
+    'matplotlib=1.4*' \
+    'scipy=0.15*' \
+    'seaborn=0.6*' \
+    'scikit-learn=0.16*' \
+    'scikit-image=0.11*' \
+    'sympy=0.7*' \
+    'cython=0.22*' \
+    'patsy=0.3*' \
+    'statsmodels=0.6*' \
+    'cloudpickle=0.1*' \
+    'dill=0.2*' \
+    'numba=0.20*' \
+    'bokeh=0.9*' \
+    && conda clean -yt
+
+# Install Python 2 packages and kernel spec
+RUN conda create -p $CONDA_DIR/envs/python2 python=2.7 \
+    'ipython=3.2*' \
+    'pandas=0.16*' \
+    'matplotlib=1.4*' \
+    'scipy=0.15*' \
+    'seaborn=0.6*' \
+    'scikit-learn=0.16*' \
+    'scikit-image=0.11*' \
+    'sympy=0.7*' \
+    'cython=0.22*' \
+    'patsy=0.3*' \
+    'statsmodels=0.6*' \
+    'cloudpickle=0.1*' \
+    'dill=0.2*' \
+    'numba=0.20*' \
+    'bokeh=0.9*' \
+    pyzmq \
+    && conda clean -yt
+RUN $CONDA_DIR/envs/python2/bin/python \
+    $CONDA_DIR/envs/python2/bin/ipython \
+    kernelspec install-self --user
+
+# R packages
+RUN conda config --add channels r
+RUN conda install --yes \
+    'r-base=3.2*' \
+    'r-irkernel=0.4*' \
+    'r-plyr=1.8*' \
+    'r-devtools=1.8*' \
+    'r-dplyr=0.4*' \
+    'r-ggplot2=1.0*' \
+    'r-tidyr=0.2*' \
+    'r-shiny=0.12*' \
+    'r-rmarkdown=0.7*' \
+    'r-forecast=5.8*' \
+    'r-stringr=0.6*' \
+    'r-rsqlite=1.0*' \
+    'r-reshape2=1.4*' \
+    'r-nycflights13=0.1*' \
+    'r-caret=6.0*' \
+    'r-rcurl=1.95*' \
+    'r-randomforest=4.6*' && conda clean -yt
+
+# Switch back to root so that supervisord runs under that user
+USER root

datascience-notebook/README.md

@@ -1,4 +1,4 @@
-# Jupyter Notebook Scientific Python Stack
+# Jupyter Notebook Data Science Stack
 
 ## What it Gives You
 

datascience-notebook/README.md~

@@ -0,0 +1,30 @@
+# Jupyter Notebook Scientific Python Stack
+
+## What it Gives You
+
+* Jupyter Notebook server v3.2.x
+* Conda Python 3.4.x and Python 2.7.x environments
+* pandas, matplotlib, scipy, seaborn, scikit-learn, scikit-image, sympy, cython, patsy, statsmodel, cloudpickle, dill, numba, bokeh pre-installed
+* Conda R v3.2.x and channel
+* plyr, devtools, dplyr, ggplot2, tidyr, shiny, rmarkdown, forecast, stringr, rsqlite, reshape2, nycflights13, caret, rcurl, and randomforest pre-installed
+* Options for HTTPS, password auth, and passwordless `sudo`
+
+## Basic Use
+
+The following command starts a container with the Notebook server listening for HTTP connections on port 8888 without authentication configured.
+
+```
+docker run -d -p 8888:8888 jupyter/scipy-notebook
+```
+
+## Options
+
+You may customize the execution of the Docker container and the Notebook server it contains with the following optional arguments.
+
+* `-e PASSWORD="YOURPASS"` - Configures Jupyter Notebook to require the given password. Should be conbined with `USE_HTTPS` on untrusted networks.
+* `-e USE_HTTPS=yes` - Configures Jupyter Notebook to accept encrypted HTTPS connections. If a `pem` file containing a SSL certificate and key is not found in `/home/jovyan/.ipython/profile_default/security/notebook.pem`, the container will generate a self-signed certificate for you.
+* `-e GRANT_SUDO=yes` - Gives the `jovyan` user passwordless `sudo` capability. Useful for installing OS packages. **You should only enable `sudo` if you trust the user or if the container is running on an isolated host.**
+* `-v /some/host/folder/for/work:/home/jovyan/work` - Host mounts the default working directory on the host to preserve work even when the container is destroyed and recreated (e.g., during an upgrade).
+* `-v /some/host/folder/for/server.pem:/home/jovyan/.ipython/profile_default/security/notebook.pem` - Mounts a SSL certificate plus key for `USE_HTTPS`. Useful if you have a real certificate for the domain under which you are running the Notebook server.
+* `-e INTERFACE=10.10.10.10` - Configures Jupyter Notebook to listen on the given interface. Defaults to '*', all interfaces, which is appropriate when running using default bridged Docker networking. When using Docker's `--net=host`, you may wish to use this option to specify a particular network interface.
+* `-e PORT=8888` - Configures Jupyter Notebook to listen on the given port. Defaults to 8888, which is the port exposed within the Dockerfile for the image. When using Docker's `--net=host`, you may wish to use this option to specify a particular port.