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Merge pull request #1069 from mpmdean/add_pytables_bottleneck

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add pytables and bottleneck
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Peter Parente
2020-04-26 15:34:55 -04:00
committed by GitHub
parent 29f53f8b99 7fef9cb754
commit 06c5cf64ef
3 changed files with 5 additions and 2 deletions
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2
docs/using/selecting.md
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@@ -82,7 +82,7 @@ packages from [conda-forge](https://conda-forge.github.io/feedstocks)
[statsmodel](http://www.statsmodels.org/stable/index.html), [cloudpickle](https://github.com/cloudpipe/cloudpickle), [dill](https://pypi.python.org/pypi/dill), [statsmodel](http://www.statsmodels.org/stable/index.html), [cloudpickle](https://github.com/cloudpipe/cloudpickle), [dill](https://pypi.python.org/pypi/dill),
[numba](https://numba.pydata.org/), [bokeh](https://bokeh.pydata.org/en/latest/), [sqlalchemy](https://www.sqlalchemy.org/), [hdf5](http://www.h5py.org/), [numba](https://numba.pydata.org/), [bokeh](https://bokeh.pydata.org/en/latest/), [sqlalchemy](https://www.sqlalchemy.org/), [hdf5](http://www.h5py.org/),
[vincent](http://vincent.readthedocs.io/en/latest/), [beautifulsoup](https://www.crummy.com/software/BeautifulSoup/), [vincent](http://vincent.readthedocs.io/en/latest/), [beautifulsoup](https://www.crummy.com/software/BeautifulSoup/),
[protobuf](https://developers.google.com/protocol-buffers/docs/pythontutorial), and [xlrd](http://www.python-excel.org/) packages [protobuf](https://developers.google.com/protocol-buffers/docs/pythontutorial), [xlrd](http://www.python-excel.org/), [bottleneck](https://bottleneck.readthedocs.io/en/latest/), and [pytables](https://www.pytables.org/) packages
* [ipywidgets](https://ipywidgets.readthedocs.io/en/stable/) and [ipympl](https://github.com/matplotlib/jupyter-matplotlib) for interactive visualizations and plots in Python notebooks * [ipywidgets](https://ipywidgets.readthedocs.io/en/stable/) and [ipympl](https://github.com/matplotlib/jupyter-matplotlib) for interactive visualizations and plots in Python notebooks
* [Facets](https://github.com/PAIR-code/facets) for visualizing machine learning datasets * [Facets](https://github.com/PAIR-code/facets) for visualizing machine learning datasets

2
scipy-notebook/Dockerfile
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@@ -19,6 +19,7 @@ RUN conda install --quiet --yes \
'beautifulsoup4=4.8.*' \ 'beautifulsoup4=4.8.*' \
'conda-forge::blas=*=openblas' \ 'conda-forge::blas=*=openblas' \
'bokeh=2.0.*' \ 'bokeh=2.0.*' \
'bottleneck=1.3.*' \
'cloudpickle=1.3.*' \ 'cloudpickle=1.3.*' \
'cython=0.29.*' \ 'cython=0.29.*' \
'dask=2.14.*' \ 'dask=2.14.*' \
@@ -33,6 +34,7 @@ RUN conda install --quiet --yes \
'pandas=1.0.*' \ 'pandas=1.0.*' \
'patsy=0.5.*' \ 'patsy=0.5.*' \
'protobuf=3.11.*' \ 'protobuf=3.11.*' \
'pytables=3.6.*' \
'scikit-image=0.16.*' \ 'scikit-image=0.16.*' \
'scikit-learn=0.22.*' \ 'scikit-learn=0.22.*' \
'scipy=1.4.*' \ 'scipy=1.4.*' \

1
test/test_packages.py
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@@ -51,6 +51,7 @@ PACKAGE_MAPPING = {
"scikit-learn": "sklearn", "scikit-learn": "sklearn",
"scikit-image": "skimage", "scikit-image": "skimage",
"spylon-kernel": "spylon_kernel", "spylon-kernel": "spylon_kernel",
"pytables": "tables",
# R # R
"randomforest": "randomForest", "randomforest": "randomForest",
"rsqlite": "DBI", "rsqlite": "DBI",