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Remove inkscape package from the minimal-notebook (#1765)

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* Removing inkscape

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Adding Rprofile to add plot_mimetypes

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update datascience-notebook/Dockerfile

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>

* Update datascience-notebook/Rprofile.site

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>

* Adding R notebook tests

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Moving Rprofile.site to minimal;
Removing duplicate R test code

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fixing flake8 errors

* Update minimal-notebook/Dockerfile

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>

* Update minimal-notebook/Rprofile.site

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>

* Removing empty line

* Renaming minetypes to  mimetypes

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Renaming test module to avoid mypy error

* Adding to jupyter.plot_mimetypes

* Update R_mimetype_check.py

* Update test_mimetypes.py

* Update test_R_mimetypes.py

* Update test_R_mimetypes.py

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
This commit is contained in:
Darek
2022-08-20 02:17:03 -04:00
committed by GitHub
parent 0d65a32356
commit 0fd68f0e6a
7 changed files with 51 additions and 21 deletions
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5
minimal-notebook/Dockerfile
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@@ -21,8 +21,6 @@ RUN apt-get update --yes && \
tzdata \
unzip \
vim-tiny \
# Inkscape is installed to be able to convert SVG files
inkscape \
# git-over-ssh
openssh-client \
# less is needed to run help in R
@@ -40,3 +38,6 @@ RUN update-alternatives --install /usr/bin/nano nano /bin/nano-tiny 10
# Switch back to jovyan to avoid accidental container runs as root
USER ${NB_UID}
# Add R mimetype option to specify how the plot returns from R to the browser
COPY --chown=${NB_UID}:${NB_GID} Rprofile.site /opt/conda/lib/R/etc/

4
minimal-notebook/Rprofile.site Normal file
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@@ -0,0 +1,4 @@
# Add R mimetype to specify how the plot returns from R to the browser.
# https://notebook.community/andrie/jupyter-notebook-samples/Changing%20R%20plot%20options%20in%20Jupyter
options(jupyter.plot_mimetypes = c('text/plain', 'image/png', 'image/jpeg', 'image/svg+xml', 'application/pdf'))