Merge pull request #1100 from romainx/hadolint

Docker linting -> Hadolint
This commit is contained in:
Peter Parente
2020-06-13 13:22:30 -04:00
committed by GitHub
12 changed files with 175 additions and 49 deletions

3
.hadolint.yaml Normal file
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@@ -0,0 +1,3 @@
ignored:
- DL3006
- DL3008

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@@ -12,10 +12,11 @@ jobs:
install: install:
- pip install --upgrade pip - pip install --upgrade pip
- make dev-env - make dev-env
- make lint-install
script: script:
- set -e - set -e
- if [ $(make n-docs-diff) -ne 0 ]; then make docs; fi; - if [ $(make n-docs-diff) -ne 0 ]; then make docs; fi;
- if [ $(make n-other-diff) -ne 0 ]; then make build-test-all DARGS="--build-arg TEST_ONLY_BUILD=1"; fi; - if [ $(make n-other-diff) -ne 0 ]; then make lint-build-test-all DARGS="--build-arg TEST_ONLY_BUILD=1"; fi;
- stage: push-tx - stage: push-tx
install: install:
- pip install --upgrade pip - pip install --upgrade pip
@@ -26,10 +27,11 @@ jobs:
install: install:
- pip install --upgrade pip - pip install --upgrade pip
- make dev-env - make dev-env
- make lint-install
script: script:
- set -e - set -e
- make docs - make docs
- make build-test-all DARGS="--build-arg TEST_ONLY_BUILD=1" - make lint-build-test-all DARGS="--build-arg TEST_ONLY_BUILD=1"
stages: stages:
- name: diff-test - name: diff-test

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@@ -24,6 +24,9 @@ endif
ALL_IMAGES:=$(ALL_STACKS) ALL_IMAGES:=$(ALL_STACKS)
# Linter
HADOLINT="${HOME}/hadolint"
help: help:
# http://marmelab.com/blog/2016/02/29/auto-documented-makefile.html # http://marmelab.com/blog/2016/02/29/auto-documented-makefile.html
@echo "jupyter/docker-stacks" @echo "jupyter/docker-stacks"
@@ -73,6 +76,23 @@ dev/%: ## run a foreground container for a stack
dev-env: ## install libraries required to build docs and run tests dev-env: ## install libraries required to build docs and run tests
pip install -r requirements-dev.txt pip install -r requirements-dev.txt
lint/%: ARGS?=
lint/%: ## lint the dockerfile(s) for a stack
@echo "Linting Dockerfiles in $(notdir $@)..."
@git ls-files --exclude='Dockerfile*' --ignored $(notdir $@) | grep -v ppc64 | xargs -L 1 $(HADOLINT) $(ARGS)
@echo "Linting done!"
lint-all: $(foreach I,$(ALL_IMAGES),lint/$(I) ) ## lint all stacks
lint-build-test-all: $(foreach I,$(ALL_IMAGES),lint/$(I) arch_patch/$(I) build/$(I) test/$(I) ) ## lint, build and test all stacks
lint-install: ## install hadolint
@echo "Installing hadolint at $(HADOLINT) ..."
@curl -sL -o $(HADOLINT) "https://github.com/hadolint/hadolint/releases/download/v1.17.6/hadolint-$(shell uname -s)-$(shell uname -m)"
@chmod 700 $(HADOLINT)
@echo "Installation done!"
@$(HADOLINT) --version
img-clean: img-rm-dang img-rm ## clean dangling and jupyter images img-clean: img-rm-dang img-rm ## clean dangling and jupyter images
img-list: ## list jupyter images img-list: ## list jupyter images

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@@ -30,22 +30,23 @@ RUN conda install --quiet --yes \
'r-sparklyr=1.2*' \ 'r-sparklyr=1.2*' \
&& \ && \
conda clean --all -f -y && \ conda clean --all -f -y && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
# Apache Toree kernel # Apache Toree kernel
# hadolint ignore=DL3013
RUN pip install --no-cache-dir \ RUN pip install --no-cache-dir \
https://dist.apache.org/repos/dist/release/incubator/toree/0.3.0-incubating/toree-pip/toree-0.3.0.tar.gz \ https://dist.apache.org/repos/dist/release/incubator/toree/0.3.0-incubating/toree-pip/toree-0.3.0.tar.gz \
&& \ && \
jupyter toree install --sys-prefix && \ jupyter toree install --sys-prefix && \
rm -rf /home/$NB_USER/.local && \ rm -rf "/home/${NB_USER}/.local" && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
# Spylon-kernel # Spylon-kernel
RUN conda install --quiet --yes 'spylon-kernel=0.4*' && \ RUN conda install --quiet --yes 'spylon-kernel=0.4*' && \
conda clean --all -f -y && \ conda clean --all -f -y && \
python -m spylon_kernel install --sys-prefix && \ python -m spylon_kernel install --sys-prefix && \
rm -rf /home/$NB_USER/.local && \ rm -rf "/home/${NB_USER}/.local" && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"

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@@ -13,6 +13,9 @@ ARG NB_USER="jovyan"
ARG NB_UID="1000" ARG NB_UID="1000"
ARG NB_GID="100" ARG NB_GID="100"
# Fix DL4006
SHELL ["/bin/bash", "-o", "pipefail", "-c"]
USER root USER root
# Install all OS dependencies for notebook server that starts but lacks all # Install all OS dependencies for notebook server that starts but lacks all
@@ -76,8 +79,8 @@ ENV MINICONDA_VERSION=4.8.2 \
MINICONDA_MD5=87e77f097f6ebb5127c77662dfc3165e \ MINICONDA_MD5=87e77f097f6ebb5127c77662dfc3165e \
CONDA_VERSION=4.8.2 CONDA_VERSION=4.8.2
RUN cd /tmp && \ WORKDIR /tmp
wget --quiet https://repo.continuum.io/miniconda/Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh && \ RUN wget --quiet https://repo.continuum.io/miniconda/Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh && \
echo "${MINICONDA_MD5} *Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh" | md5sum -c - && \ echo "${MINICONDA_MD5} *Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh" | md5sum -c - && \
/bin/bash Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh -f -b -p $CONDA_DIR && \ /bin/bash Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh -f -b -p $CONDA_DIR && \
rm Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh && \ rm Miniconda3-py37_${MINICONDA_VERSION}-Linux-x86_64.sh && \
@@ -137,3 +140,5 @@ RUN fix-permissions /etc/jupyter/
# Switch back to jovyan to avoid accidental container runs as root # Switch back to jovyan to avoid accidental container runs as root
USER $NB_UID USER $NB_UID
WORKDIR $HOME

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@@ -9,6 +9,9 @@ LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"
# be skipped to shorten build time. # be skipped to shorten build time.
ARG TEST_ONLY_BUILD ARG TEST_ONLY_BUILD
# Fix DL4006
SHELL ["/bin/bash", "-o", "pipefail", "-c"]
USER root USER root
# R pre-requisites # R pre-requisites
@@ -25,21 +28,23 @@ ENV JULIA_DEPOT_PATH=/opt/julia
ENV JULIA_PKGDIR=/opt/julia ENV JULIA_PKGDIR=/opt/julia
ENV JULIA_VERSION=1.4.1 ENV JULIA_VERSION=1.4.1
RUN mkdir /opt/julia-${JULIA_VERSION} && \ WORKDIR /tmp
cd /tmp && \
wget -q https://julialang-s3.julialang.org/bin/linux/x64/`echo ${JULIA_VERSION} | cut -d. -f 1,2`/julia-${JULIA_VERSION}-linux-x86_64.tar.gz && \ # hadolint ignore=SC2046
RUN mkdir "/opt/julia-${JULIA_VERSION}" && \
wget -q https://julialang-s3.julialang.org/bin/linux/x64/$(echo "${JULIA_VERSION}" | cut -d. -f 1,2)"/julia-${JULIA_VERSION}-linux-x86_64.tar.gz" && \
echo "fd6d8cadaed678174c3caefb92207a3b0e8da9f926af6703fb4d1e4e4f50610a *julia-${JULIA_VERSION}-linux-x86_64.tar.gz" | sha256sum -c - && \ echo "fd6d8cadaed678174c3caefb92207a3b0e8da9f926af6703fb4d1e4e4f50610a *julia-${JULIA_VERSION}-linux-x86_64.tar.gz" | sha256sum -c - && \
tar xzf julia-${JULIA_VERSION}-linux-x86_64.tar.gz -C /opt/julia-${JULIA_VERSION} --strip-components=1 && \ tar xzf "julia-${JULIA_VERSION}-linux-x86_64.tar.gz" -C "/opt/julia-${JULIA_VERSION}" --strip-components=1 && \
rm /tmp/julia-${JULIA_VERSION}-linux-x86_64.tar.gz rm "/tmp/julia-${JULIA_VERSION}-linux-x86_64.tar.gz"
RUN ln -fs /opt/julia-*/bin/julia /usr/local/bin/julia RUN ln -fs /opt/julia-*/bin/julia /usr/local/bin/julia
# Show Julia where conda libraries are \ # Show Julia where conda libraries are \
RUN mkdir /etc/julia && \ RUN mkdir /etc/julia && \
echo "push!(Libdl.DL_LOAD_PATH, \"$CONDA_DIR/lib\")" >> /etc/julia/juliarc.jl && \ echo "push!(Libdl.DL_LOAD_PATH, \"$CONDA_DIR/lib\")" >> /etc/julia/juliarc.jl && \
# Create JULIA_PKGDIR \ # Create JULIA_PKGDIR \
mkdir $JULIA_PKGDIR && \ mkdir "${JULIA_PKGDIR}" && \
chown $NB_USER $JULIA_PKGDIR && \ chown "${NB_USER}" "${JULIA_PKGDIR}" && \
fix-permissions $JULIA_PKGDIR fix-permissions "${JULIA_PKGDIR}"
USER $NB_UID USER $NB_UID
@@ -66,8 +71,8 @@ RUN conda install --quiet --yes \
'rpy2=3.1*' \ 'rpy2=3.1*' \
&& \ && \
conda clean --all -f -y && \ conda clean --all -f -y && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
# Add Julia packages. Only add HDF5 if this is not a test-only build since # Add Julia packages. Only add HDF5 if this is not a test-only build since
# it takes roughly half the entire build time of all of the images on Travis # it takes roughly half the entire build time of all of the images on Travis
@@ -80,7 +85,9 @@ RUN julia -e 'import Pkg; Pkg.update()' && \
(test $TEST_ONLY_BUILD || julia -e 'import Pkg; Pkg.add("HDF5")') && \ (test $TEST_ONLY_BUILD || julia -e 'import Pkg; Pkg.add("HDF5")') && \
julia -e "using Pkg; pkg\"add IJulia\"; pkg\"precompile\"" && \ julia -e "using Pkg; pkg\"add IJulia\"; pkg\"precompile\"" && \
# move kernelspec out of home \ # move kernelspec out of home \
mv $HOME/.local/share/jupyter/kernels/julia* $CONDA_DIR/share/jupyter/kernels/ && \ mv "${HOME}/.local/share/jupyter/kernels/julia"* "${CONDA_DIR}/share/jupyter/kernels/" && \
chmod -R go+rx $CONDA_DIR/share/jupyter && \ chmod -R go+rx "${CONDA_DIR}/share/jupyter" && \
rm -rf $HOME/.local && \ rm -rf "${HOME}/.local" && \
fix-permissions $JULIA_PKGDIR $CONDA_DIR/share/jupyter fix-permissions "${JULIA_PKGDIR}" "${CONDA_DIR}/share/jupyter"
WORKDIR $HOME

78
docs/contributing/lint.md Normal file
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@@ -0,0 +1,78 @@
# Image Lint
To comply with [Docker best practices][dbp], we are using the [Hadolint][hadolint] tool to analyse each `Dockerfile` .
## Installation
There is a specific `make` target to install the linter.
By default `hadolint` will be installed in `${HOME}/hadolint`.
```bash
$ make lint-install
# Installing hadolint at /Users/romain/hadolint ...
# Installation done!
# Haskell Dockerfile Linter v1.17.6-0-gc918759
```
## Lint
### Per Stack
The linter can be run per stack.
```bash
$ make lint/scipy-notebook
# Linting Dockerfiles in scipy-notebook...
# scipy-notebook/Dockerfile:4 DL3006 Always tag the version of an image explicitly
# scipy-notebook/Dockerfile:11 DL3008 Pin versions in apt get install. Instead of `apt-get install <package>` use `apt-get install <package>=<version>`
# scipy-notebook/Dockerfile:18 SC2086 Double quote to prevent globbing and word splitting.
# scipy-notebook/Dockerfile:68 SC2086 Double quote to prevent globbing and word splitting.
# scipy-notebook/Dockerfile:68 DL3003 Use WORKDIR to switch to a directory
# scipy-notebook/Dockerfile:79 SC2086 Double quote to prevent globbing and word splitting.
# make: *** [lint/scipy-notebook] Error 1
```
Optionally you can pass arguments to the linter.
```bash
# Use a different export format
$ make lint/scipy-notebook ARGS="--format codeclimate"
```
### All the Stacks
The linter can be run against all the stacks.
```bash
$ make lint-all
```
## Ignoring Rules
Sometimes it is necessary to ignore [some rules][rules].
The following rules are ignored by default and sor for all images in the `.hadolint.yaml` file.
- [`DL3006`][DL3006]: We use a specific policy to manage image tags.
- `base-notebook` `FROM` clause is fixed but based on an argument (`ARG`).
- Building downstream images from (`FROM`) the latest is done on purpose.
- [`DL3008`][DL3008]: System packages are always updated (`apt-get`) to the latest version.
For other rules, the preferred way to do it is to flag ignored rules in the `Dockerfile`.
> It is also possible to ignore rules by using a special comment directly above the Dockerfile instruction you want to make an exception for. Ignore rule comments look like `# hadolint ignore=DL3001,SC1081`. For example:
```dockerfile
FROM ubuntu
# hadolint ignore=DL3003,SC1035
RUN cd /tmp && echo "hello!"
```
[hadolint]: https://github.com/hadolint/hadolint
[dbp]: https://docs.docker.com/develop/develop-images/dockerfile_best-practices
[rules]: https://github.com/hadolint/hadolint#rules
[DL3006]: https://github.com/hadolint/hadolint/wiki/DL3006
[DL3008]: https://github.com/hadolint/hadolint/wiki/DL3008

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@@ -47,6 +47,7 @@ Table of Contents
contributing/packages contributing/packages
contributing/recipes contributing/recipes
contributing/translations contributing/translations
contributing/lint
contributing/tests contributing/tests
contributing/features contributing/features
contributing/stacks contributing/stacks

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@@ -5,6 +5,9 @@ FROM $BASE_CONTAINER
LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>" LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"
# Fix DL4006
SHELL ["/bin/bash", "-o", "pipefail", "-c"]
USER root USER root
# Spark dependencies # Spark dependencies
@@ -16,13 +19,16 @@ RUN apt-get -y update && \
rm -rf /var/lib/apt/lists/* rm -rf /var/lib/apt/lists/*
# Using the preferred mirror to download Spark # Using the preferred mirror to download Spark
RUN cd /tmp && \ WORKDIR /tmp
wget -q $(wget -qO- https://www.apache.org/dyn/closer.lua/spark/spark-${APACHE_SPARK_VERSION}/spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz\?as_json | \ # hadolint ignore=SC2046
RUN wget -q $(wget -qO- https://www.apache.org/dyn/closer.lua/spark/spark-${APACHE_SPARK_VERSION}/spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz\?as_json | \
python -c "import sys, json; content=json.load(sys.stdin); print(content['preferred']+content['path_info'])") && \ python -c "import sys, json; content=json.load(sys.stdin); print(content['preferred']+content['path_info'])") && \
echo "2426a20c548bdfc07df288cd1d18d1da6b3189d0b78dee76fa034c52a4e02895f0ad460720c526f163ba63a17efae4764c46a1cd8f9b04c60f9937a554db85d2 *spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz" | sha512sum -c - && \ echo "2426a20c548bdfc07df288cd1d18d1da6b3189d0b78dee76fa034c52a4e02895f0ad460720c526f163ba63a17efae4764c46a1cd8f9b04c60f9937a554db85d2 *spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz" | sha512sum -c - && \
tar xzf spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz -C /usr/local --owner root --group root --no-same-owner && \ tar xzf "spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz" -C /usr/local --owner root --group root --no-same-owner && \
rm spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz rm "spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}.tgz"
RUN cd /usr/local && ln -s spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION} spark
WORKDIR /usr/local
RUN ln -s "spark-${APACHE_SPARK_VERSION}-bin-hadoop${HADOOP_VERSION}" spark
# Configure Spark # Configure Spark
ENV SPARK_HOME=/usr/local/spark ENV SPARK_HOME=/usr/local/spark
@@ -35,5 +41,7 @@ USER $NB_UID
# Install pyarrow # Install pyarrow
RUN conda install --quiet -y 'pyarrow' && \ RUN conda install --quiet -y 'pyarrow' && \
conda clean --all -f -y && \ conda clean --all -f -y && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
WORKDIR $HOME

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@@ -47,7 +47,7 @@ RUN conda install --quiet --yes \
'unixodbc=2.3.*' \ 'unixodbc=2.3.*' \
&& \ && \
conda clean --all -f -y && \ conda clean --all -f -y && \
fix-permissions $CONDA_DIR fix-permissions "${CONDA_DIR}"
# Install e1071 R package (dependency of the caret R package) # Install e1071 R package (dependency of the caret R package)
RUN conda install --quiet --yes r-e1071 RUN conda install --quiet --yes r-e1071

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@@ -59,24 +59,25 @@ RUN conda install --quiet --yes \
jupyter lab build -y && \ jupyter lab build -y && \
jupyter lab clean -y && \ jupyter lab clean -y && \
npm cache clean --force && \ npm cache clean --force && \
rm -rf /home/$NB_USER/.cache/yarn && \ rm -rf "/home/${NB_USER}/.cache/yarn" && \
rm -rf /home/$NB_USER/.node-gyp && \ rm -rf "/home/${NB_USER}/.node-gyp" && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
# Install facets which does not have a pip or conda package at the moment # Install facets which does not have a pip or conda package at the moment
RUN cd /tmp && \ WORKDIR /tmp
git clone https://github.com/PAIR-code/facets.git && \ RUN git clone https://github.com/PAIR-code/facets.git && \
cd facets && \ jupyter nbextension install facets/facets-dist/ --sys-prefix && \
jupyter nbextension install facets-dist/ --sys-prefix && \
cd && \
rm -rf /tmp/facets && \ rm -rf /tmp/facets && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
# Import matplotlib the first time to build the font cache. # Import matplotlib the first time to build the font cache.
ENV XDG_CACHE_HOME /home/$NB_USER/.cache/ ENV XDG_CACHE_HOME="/home/${NB_USER}/.cache/"
RUN MPLBACKEND=Agg python -c "import matplotlib.pyplot" && \ RUN MPLBACKEND=Agg python -c "import matplotlib.pyplot" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"
USER $NB_UID USER $NB_UID
WORKDIR $HOME

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@@ -8,5 +8,5 @@ LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"
# Install Tensorflow # Install Tensorflow
RUN pip install --quiet --no-cache-dir \ RUN pip install --quiet --no-cache-dir \
'tensorflow==2.2.0' && \ 'tensorflow==2.2.0' && \
fix-permissions $CONDA_DIR && \ fix-permissions "${CONDA_DIR}" && \
fix-permissions /home/$NB_USER fix-permissions "/home/${NB_USER}"