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Update troubleshooting.md
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@@ -167,13 +167,13 @@ If you have also **created a new user**, you might be experiencing any of the fo
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In the example above, the `-v` flag is used to mount the local volume onto the new user's `/home` directory.
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However, if you are mounting a volume elsewhere, you also need to use the `-e CHOWN_EXTRA=<some-dir>` flag to avoid any permission
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issues (see the section [Permission denied when mounting volumes](#permission-denied-when-mounting-volumes) in this page).
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issues (see the section [Permission denied when mounting volumes](#permission-denied-when-mounting-volumes) on this page).
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```
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2. **Dynamically assign the user ID and GID**
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The above case ensures that the `/home` directory is owned by a newly created user with a specific `UID` and `GID`,
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but if you want to assign the `UID` and `GID` of the new user dynamically you can make the following adjustments:
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but if you want to assign the `UID` and `GID` of the new user dynamically, you can make the following adjustments:
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```bash
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docker run -it --rm \
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@@ -261,7 +261,7 @@ conda config --show default_channels
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You can install packages from other conda channels (e.g. bioconda) by disabling the `channel_priority` setting:
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```bash
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# install by disabling channel priority at command level
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# install by disabling channel priority at еру command level
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conda install --no-channel-priority -c bioconda bioconductor-geoquery
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```
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@@ -303,7 +303,7 @@ If you are a regular user of VSCode and the Jupyter extension, you might experie
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kill 3412
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```
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2. **Turn off Jupyter auto start in VSCode**
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2. **Turn off Jupyter auto-start in VSCode**
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Alternatively - you might want to ensure that the `Jupyter: Auto Start` setting is turned off to avoid this issue in the future.
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