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Automatically install latest julia version (#2046)
* Automatically install latest julia version * Better text * Fix * Fix * Update setup-julia.bash * Install plumbum * Better docs * Better docs * Use subprocess.check_call instead of plumbum * Do not use dash in python filename * Remove plumbum from the image * Remove jq from the image * Remove setup-julia.bash file * Fix file name * Fix docstring
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85
images/minimal-notebook/setup-scripts/setup_julia.py
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85
images/minimal-notebook/setup-scripts/setup_julia.py
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#!/usr/bin/env python3
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# Copyright (c) Jupyter Development Team.
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# Distributed under the terms of the Modified BSD License.
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# Requirements:
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# - Run as the root user
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# - The JULIA_PKGDIR environment variable is set
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import os
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import platform
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import shutil
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import subprocess
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from pathlib import Path
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import requests
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def unify_aarch64(platform: str) -> str:
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"""
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Renames arm64->aarch64 to support local builds on on aarch64 Macs
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"""
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return {
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"aarch64": "aarch64",
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"arm64": "aarch64",
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"x86_64": "x86_64",
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}[platform]
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def get_latest_julia_url() -> tuple[str, str]:
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"""
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Get the last stable version of Julia
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Based on: https://github.com/JuliaLang/www.julialang.org/issues/878#issuecomment-749234813
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"""
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versions = requests.get(
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"https://julialang-s3.julialang.org/bin/versions.json"
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).json()
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stable_versions = {k: v for k, v in versions.items() if v["stable"]}
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latest_version_files = stable_versions[max(stable_versions)]["files"]
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triplet = unify_aarch64(platform.machine()) + "-linux-gnu"
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file_info = [vf for vf in latest_version_files if vf["triplet"] == triplet][0]
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return file_info["url"], file_info["version"]
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def download_julia(julia_url: str) -> None:
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"""
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Downloads and unpacks julia
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The resulting julia directory is "/opt/julia-VERSION/"
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"""
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tmp_file = Path("/tmp/julia.tar.gz")
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subprocess.check_call(
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["curl", "--progress-bar", "--location", "--output", tmp_file, julia_url]
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)
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shutil.unpack_archive(tmp_file, "/opt/")
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tmp_file.unlink()
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def prepare_julia(julia_version: str) -> None:
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"""
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Creates /usr/local/bin/julia symlink
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Make Julia aware of conda libraries
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Creates a directory for Julia user libraries
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"""
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# Link Julia installed version to /usr/local/bin, so julia launches it
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subprocess.check_call(
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["ln", "-fs", f"/opt/julia-{julia_version}/bin/julia", "/usr/local/bin/julia"]
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)
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# Tell Julia where conda libraries are
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Path("/etc/julia").mkdir()
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Path("/etc/julia/juliarc.jl").write_text(
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f'push!(Libdl.DL_LOAD_PATH, "{os.environ["CONDA_DIR"]}/lib")\n'
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)
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# Create JULIA_PKGDIR, where user libraries are installed
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JULIA_PKGDIR = Path(os.environ["JULIA_PKGDIR"])
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JULIA_PKGDIR.mkdir()
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subprocess.check_call(["chown", os.environ["NB_USER"], JULIA_PKGDIR])
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subprocess.check_call(["fix-permissions", JULIA_PKGDIR])
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if __name__ == "__main__":
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julia_url, julia_version = get_latest_julia_url()
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download_julia(julia_url=julia_url)
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prepare_julia(julia_version=julia_version)
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