Commit Graph

3555 Commits

Author SHA1 Message Date
Ayaz Salikhov
1030850c64 Update packages.md 2023-02-09 13:34:44 +04:00
Ayaz Salikhov
8c3404c6b9 Update lint.md 2023-02-09 13:32:46 +04:00
Ayaz Salikhov
e404c120fe Update issues.md 2023-02-09 13:27:18 +04:00
Ayaz Salikhov
391a46bb31 Update features.md 2023-02-09 13:23:15 +04:00
Ayaz Salikhov
1dc312a1d5 Install rpy2 on aarch64 as well (#1871) 2023-02-08 18:53:10 +04:00
pre-commit-ci[bot]
566e2d29a0 [pre-commit.ci] pre-commit autoupdate (#1870)
updates:
- [github.com/psf/black: 22.12.0 → 23.1.0](https://github.com/psf/black/compare/22.12.0...23.1.0)
- [github.com/adrienverge/yamllint.git: v1.28.0 → v1.29.0](https://github.com/adrienverge/yamllint.git/compare/v1.28.0...v1.29.0)
- [github.com/igorshubovych/markdownlint-cli: v0.32.2 → v0.33.0](https://github.com/igorshubovych/markdownlint-cli/compare/v0.32.2...v0.33.0)
- [github.com/nbQA-dev/nbQA: 1.6.0 → 1.6.1](https://github.com/nbQA-dev/nbQA/compare/1.6.0...1.6.1)
- [github.com/asottile/blacken-docs: v1.12.1 → 1.13.0](https://github.com/asottile/blacken-docs/compare/v1.12.1...1.13.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2023-02-07 11:34:57 +04:00
Ayaz Salikhov
e4d13badfc Fix redirect link 2023-02-06 12:30:18 +04:00
Ayaz Salikhov
5db661cd66 Fix broken link 2023-02-06 11:21:37 +04:00
Ayaz Salikhov
1ffe43816b Update isort 2023-01-29 15:11:54 +04:00
Olivier Benz
6fe403919f Add GPU accelerated images by b-data to community (#1864)
* Add GPU accelerated images by b-data to community

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2023-01-26 09:20:55 +04:00
Erik Sundell
1387ff70e3 Merge pull request #1860 from mathbunnyru/asalikhov/update_docs_template
Update sphinx default config
2023-01-24 11:28:06 +01:00
Ayaz Salikhov
51ccb3e018 Update sphinx default config 2023-01-24 14:23:39 +04:00
Muhammad Aji Muharrom
0d324bc0b3 Parameterize healthcheck by internal port (#1859)
* Use the JUPYTER_PORT environment variable to configure server port

- Remove port setting in jupyter_server_config.py
- Declare the $JUPYTER_PORT env on the base Dockerfile
- Use it for HEALTHCHECK

* Add test case for JUPYTER_PORT env variable

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update documentation

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update style

* Better wording

* Better wording

* Add test for custom internal port

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Parametrize internal port test case

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Try to fix test

* Better tests

Co-authored-by: Muhammad Aji Muharrom <ajimuharrom@uchicago.edu>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@gmail.com>
2023-01-24 11:19:39 +04:00
Ayaz Salikhov
e014bb8ec5 Fix url 2023-01-16 12:48:14 +04:00
Ayaz Salikhov
0e871e65ac Improve issue template (#1857) 2023-01-14 12:31:36 +04:00
Kyungdahm Yun
c2a30b2d7f Update Julia to 1.8.5 (#1858) 2023-01-13 12:49:56 +04:00
Ayaz Salikhov
a905ff6f6d Check healthcheck in all jupyter applications (#1854)
* Check healthcheck in all jupyter applications

* Fix

* Remove JUPYTERHUB_API_TOKEN healthcheck test
2023-01-04 10:24:09 +04:00
Ayaz Salikhov
c9ac681f8f Increase sleep for healthcheck 2023-01-01 12:07:37 +03:00
Ayaz Salikhov
2a1cd45ebf Pin jupyter_server>=2.0.0 (#1853)
* Pin jupyter_server==2.0.0

* Update scipy-notebook/Dockerfile

Co-authored-by: Erik Sundell <erik.i.sundell@gmail.com>

* Fix test

* Fix test

* Test healthcheck properly

* Fix typing

Co-authored-by: Erik Sundell <erik.i.sundell@gmail.com>
2022-12-30 11:08:27 +02:00
Ayaz Salikhov
6d1862cf30 Autoupdate pre-commit monthly 2022-12-27 22:36:39 +02:00
pre-commit-ci[bot]
0c92fd3118 [pre-commit.ci] pre-commit autoupdate (#1850)
updates:
- [github.com/pycqa/isort: v5.11.3 → 5.11.4](https://github.com/pycqa/isort/compare/v5.11.3...5.11.4)
- [github.com/nbQA-dev/nbQA: 1.5.3 → 1.6.0](https://github.com/nbQA-dev/nbQA/compare/1.5.3...1.6.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2022-12-27 22:32:49 +02:00
pre-commit-ci[bot]
5da9d4c932 [pre-commit.ci] pre-commit autoupdate (#1849) 2022-12-20 09:17:02 +04:00
Ayaz Salikhov
523d542bc2 Fix grammar 2022-12-20 01:19:14 +04:00
Bastian Fredriksson
f8aca249b7 Recipe for Microsoft SQL Server (#1847)
* Recipe for Microsoft SQL Server

Dockerfile with Microsoft SQL Server ODBC driver and pyodbc.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Get rid of apt-key, only install what's needed and clean up properly

* Replace apt-get with apt

* Switch from apt to apt-get

* Use --no-install-recommends in the right place

* Use simple pip install

* Install pip package under jovyan

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
2022-12-18 01:36:56 +04:00
Ayaz Salikhov
b7bdec6b11 Update workflow descriptions 2022-12-15 13:26:55 +04:00
Ayaz Salikhov
14068d88e6 Rename GitHub workflow properly 2022-12-13 21:41:29 +04:00
pre-commit-ci[bot]
820704c49a [pre-commit.ci] pre-commit autoupdate (#1846) 2022-12-13 09:07:36 +04:00
Ayaz Salikhov
08d6f22870 Do not update hub-overview in forks 2022-12-11 11:29:32 +04:00
Ayaz Salikhov
7935ced6fa Unify workflow syntax 2022-12-11 11:27:45 +04:00
Ayaz Salikhov
a4f53d1b5c Sort entries when reusing GitHub workflows 2022-12-10 22:00:35 +04:00
Ayaz Salikhov
9d45f82516 Disable running aarch64 builds in forks 2022-12-10 21:49:32 +04:00
Ayaz Salikhov
ae7786471c Be more careful in running sphinx in forks 2022-12-10 09:38:22 +04:00
Ayaz Salikhov
cdfd63a387 Make workflows work fine in forked repos (#1845) 2022-12-10 00:36:59 +04:00
lexi2042
23bf11f66b add recipe for installing ijavascript kernel (#1840)
* add recipe for installing ijavascript kernel

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update docs/using/recipes.md

* Update docs/using/recipes.md

Co-authored-by: Erik Sundell <erik.i.sundell@gmail.com>

* stop installing ijavascript in $HOME

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
Co-authored-by: Erik Sundell <erik.i.sundell@gmail.com>
2022-12-07 00:07:39 +02:00
pre-commit-ci[bot]
39ccd5030f [pre-commit.ci] pre-commit autoupdate (#1842) 2022-12-06 08:05:27 +02:00
dependabot[bot]
1840ddc9dc Bump stefanzweifel/git-auto-commit-action from 4.15.4 to 4.16.0 (#1841)
Bumps [stefanzweifel/git-auto-commit-action](https://github.com/stefanzweifel/git-auto-commit-action) from 4.15.4 to 4.16.0.
- [Release notes](https://github.com/stefanzweifel/git-auto-commit-action/releases)
- [Changelog](https://github.com/stefanzweifel/git-auto-commit-action/blob/master/CHANGELOG.md)
- [Commits](0b007fbd11...3ea6ae190b)

---
updated-dependencies:
- dependency-name: stefanzweifel/git-auto-commit-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-12-05 18:18:59 +02:00
Ayaz Salikhov
bd658995bd Fix interactive block diag link 2022-11-29 01:08:47 +04:00
Ayaz Salikhov
865618cea4 Update pre-commit hooks 2022-11-28 13:16:32 +04:00
pre-commit-ci[bot]
3772a8085d [pre-commit.ci] pre-commit autoupdate (#1834) 2022-11-22 10:01:15 +04:00
Kyungdahm Yun
2ace7f7108 Update Julia to 1.8.3 (#1833) 2022-11-18 18:03:41 +04:00
Ayaz Salikhov
6cc4a8596a Better codestyle 2022-11-15 10:50:00 +04:00
pre-commit-ci[bot]
1e6f34dadc [pre-commit.ci] pre-commit autoupdate (#1829)
* [pre-commit.ci] pre-commit autoupdate

updates:
- [github.com/hadolint/hadolint.git: v2.12.0 → v2.12.1-beta](https://github.com/hadolint/hadolint.git/compare/v2.12.0...v2.12.1-beta)

* Update .pre-commit-config.yaml

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
2022-11-15 10:47:50 +04:00
Ayaz Salikhov
bb1c56b5c7 Update tag example 2022-11-13 03:46:42 +04:00
Ayaz Salikhov
ab00c8cef7 Update pre-commit hooks 2022-11-13 02:39:40 +04:00
Ayaz Salikhov
85f615d5ca Update README.md header for docker-stacks-foundation 2022-11-13 01:58:23 +04:00
Ayaz Salikhov
24cfbacf8f Make docker-stacks-foundation description less than 100 characters 2022-11-13 01:55:35 +04:00
Ayaz Salikhov
dcea9a572f Fix broken url 2022-11-13 01:47:23 +04:00
Kevin Bates
10e52ee843 Create base image to base-notebook for non-server Jupyter applications (#1825)
* Create base-jupyter from base-notebook for non-server jupyter applications

* Fix pre-commit errors and begin test refactoring

* More test refactoring

* Add base-jupyter to images_hierarchy

* Use folder work instead of .jupyter in nb-user test

* Add base-jupyter to tagging hierarchy

* Linting: trailing comma

* Apply review comments, remove obsolute Miniforge reference

* Add self-signed cert comment back to base-notebook doc

* Update docs/using/selecting.md

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>

* Remove redundant apt-get upgrade per review

* Remove b/c approaches per review

* Move test_nb_user_change back to base-notebook tests, per review

* fix linting

* Rename base-jupyter to docker-stacks-foundation, per review

* Rename tests/base-jupyter to docker-stacks-foundation

* Use alphabetical order

* Use alphabetical order

* Fix markdown style

* Split test_nb_user_change between the foundation and base tests

Co-authored-by: Ayaz Salikhov <mathbunnyru@users.noreply.github.com>
2022-11-13 01:44:44 +04:00
dependabot[bot]
6170f2394b Bump stefanzweifel/git-auto-commit-action from 4.15.3 to 4.15.4 (#1827)
Bumps [stefanzweifel/git-auto-commit-action](https://github.com/stefanzweifel/git-auto-commit-action) from 4.15.3 to 4.15.4.
- [Release notes](https://github.com/stefanzweifel/git-auto-commit-action/releases)
- [Changelog](https://github.com/stefanzweifel/git-auto-commit-action/blob/master/CHANGELOG.md)
- [Commits](0049e3fa40...0b007fbd11)

---
updated-dependencies:
- dependency-name: stefanzweifel/git-auto-commit-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-11-08 10:44:54 +01:00
Ayaz Salikhov
5168eb6548 Start using matrix in reuseable workflows directly (#1822)
* Start using matrix in reuseable workflows directly

* Fix name
2022-11-01 15:43:09 +04:00