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86 Commits

Author SHA1 Message Date
romainx
32090f6011 Update docker stack 2020-11-20 
The following changes have been made.

- `base-notebook`
  - `Changed`: Bump Ubuntu
  - `Changed`: Bump conda
  - `Fixed`: Add missing `apt-get clean`
- `minimal-notebook`
  - `Removed`: `jed` editor see #1174 (partial)
  - `Deprecated`: `emacs` editor (in the documentation and in the image) see #1174 (partial)
- `scipy-notebook`
  - `Fixed`: Add missing `apt-get clean`
  - `Changed`: Bump `dask`
  - `Changed`: Bump `protobuf`
- `r-notebook`
  - `Changed`: Bump `r-base`
  - `Changed`: Bump `r-rmarkdown`
  - `Removed`: The description of `tidyverse` packages because it's not the place to do that and it will always be obsolete.
- `datascience-notebook`
  - `Changed`: Bump `r-base` to `4.0.x` see #1102 (partial)
  - `Removed`: `plyr` package because it's retired fixes #1103
  - `Removed`: `r-reshape2` package because it's retired fixes #1103
  - `Changed`: Bump `r-rmarkdown`
  - `Changed`: Bump Julia
- `tensorflow-notebook`
  - `Changed`: Bump `tensorflow`
- `pyspark-notebook`
  - `Fixed`: Add missing `apt-get clean`
  - `Changed`: Bump `pyarrow`
- `all-spark-notebook`
  - `Fixed`: Add missing `apt-get clean`
  - `Changed`: Bump `r-base` to `4.0.x` see #1102 (partial)
  - `Changed`: Bump `r-sparklyr`
 2020-10-20 11:36:34 +02:00
Darek
568708d279 Upgrading Spark to 3.0, removing Toree 2020-06-19 00:52:51 +00:00
Romain
5e6645d137 Ignore DL3006 and DL3008 by default 2020-06-01 06:23:44 +02:00
Romain
7b48e43b74 Fix hadolint deviations 2020-05-29 19:33:24 +02:00
romainx
d3ef6d89b2 Regular update 2020 W18 
* Bump `base-notebook`
	* OS version
	* `jupyterlab`
* Bump `scipy-notebook`
	* `beautifulsoup4`
	* `cloudpickle`
	* `dask`
	* `numba`
	* `xlrd`: version specified (it was not the case)
* Bump `datascience-notebook`
	* `r-devtools`
	* `r-forecast`
	* Julia version
	* Test added to check if Julia is correctly installed (`julia --version`)
	* Note: A new version of `r-base` is out `4.0.0` however it cannot be installed yet since dependencies with other packages cannot be resolved.
* Bump `r-notebook`
	* Same as `datascience-notebook` except Julia.
* Bump `all-spark-notebook`
	* `r-sparklyr`
 2020-04-29 09:16:28 +02:00
romainx
d458afffaf Big upgrade 
- Bump root container version
- Bump  packages of
  - scipy-notebook
  - r-notebook
  - datascience-notebook
- add -y flag to jupyter lab commands in scipy-notebook
- Fix a bug in check outdated packages when packages installed through pip
 2020-04-04 23:04:45 +02:00
romainx
03ec0a592d Bump version of R packages 2020-01-30 19:01:44 +01:00
Richard Darst
8bfffcaa3f Sort package installation lines alphabetically for easier comparison 2019-08-06 10:44:10 +03:00
Richard Darst
fed5b9ac62 Update versions in all-spark-notebook 2019-08-04 02:15:30 +03:00
echowhisky
40c5c07b0a added -f flag to all conda clean commands 
This commit adds the additional `-f` force command to all uses of `conda
clean --all` through the repo. Size should be smaller, but still testing
if anything breaks. See issue #861.
 2019-05-04 19:11:32 +00:00
echowhisky
1f8311a7aa changed -tipsy to --all -y across all files 
The last commit was only for the base-notebook's Dockerfile. For this,
all the files in the repo were grepped through and changed.
 2019-05-04 18:53:49 +00:00
Chia-liang Kao
a657b782bd Move tzdata to minimal-notebook and document it 2019-03-25 16:04:04 +08:00
Peter Parente
c12adebb32 Merge pull request #782 from parente/daozzg-master 
Update all R libs in all-spark-notebook for Spark 2.4
 2018-12-29 10:34:11 -05:00
Peter Parente
8b0c000794 Update R packages 2018-12-29 00:05:19 -05:00
Tim Ryan
3fc28b67e0 Remove apt-get clean command. Unecessary on official Ubuntu images. 2018-12-17 10:40:58 -05:00
Alan
06446856b6 Update Dockerfile 2018-12-07 09:50:44 +08:00
Alan
2a25febf80 Update Dockerfile 2018-12-07 09:43:03 +08:00
Luciano Resende
7c3f276fe3 Update to official Toree 0.3.0-incubating release 2018-11-13 14:07:46 -08:00
graemes
1d763bbac5 Convert FROM specification to ARG (#727) 2018-10-19 18:52:27 +01:00
Luciano Resende
3ecff5f4b7 Update to Apache Toree 0.3.0-incubating RC1 
The RC1 contains the fix to support latest release of JupyterLab.

Fixes #710
 2018-10-18 10:35:09 -04:00
Marius van Niekerk
b37f105611 Update toree to rc5 2018-04-27 15:56:15 -04:00
Marius van Niekerk
ec73c29a20 update all-spark to toree 0.2.0rc4 2018-04-07 07:34:01 +02:00
Peter Parente
981f6e402d Notebook 5.4, force tornado 4.* at the outset 2018-03-19 08:41:56 -04:00
Peter Parente
1d94de26ad Fix other IRKernel images 2018-03-18 22:49:57 -04:00
Luciano Resende
bbf34d3473 Update to Toree 0.2.0 RC3 2018-03-05 20:50:58 -08:00
Graham Dumpleton
f4bf2ba525 Merge branch 'master' of github.com:jupyter/docker-stacks into writable-home-directory 2018-02-17 11:33:31 +11:00
Graham Dumpleton
4d32b2182e Ensure anything under $HOME is always writable to group. 2018-02-17 11:31:55 +11:00
Graham Dumpleton
770007bb10 Use NB_UID for USER statement in Dockerfile so deployment platform can verify that image doesn't run as root. 2018-02-15 11:11:32 +11:00
Alexander Treptau
4fb888122b (fix) Add tzdata as R pre-requisites. #502 2017-11-18 16:27:36 +01:00
Irving Duran
4d57b558ab Patch R package install user issues 
-The following patch addresses issue #489
(https://github.com/jupyter/docker-stacks/issues/489)
 2017-11-12 13:18:09 -06:00
cglewis
d91d4a8c48 MAINTAINER is deprecated, using LABEL now 2017-10-31 20:17:06 -07:00
Min RK
c6c1ce4cb0 use groups for managing write-access to files 
- any files the user should be able to write should have group `user-permissions` with `g+rwX`
- remove `chown` from start.sh because it is no longer needed
- add `fix-permissions` script for setting the user-writable permissions on a path
- user-permissions group as GID 10000 (is there a reason for it to have a different value?)
- containers can set group with `--group-add user-writable` if they want to run with a different uid/gid
  (without -u root -e NB_UID -e NB_GID, which make this unnecessary)
 2017-08-26 09:50:56 -04:00
Peter Parente
d968de73b0 Add r-sparklyr 2017-06-26 23:59:35 -04:00
Peter Parente
b114a06f75 Use R packages from conda-forge 2017-06-26 23:57:47 -04:00
Peter Parente
64b05ca117 Update spylon-kernel to 0.4.x 2017-06-25 12:53:58 -04:00
Min RK
c6e5e289dd reduce files in home directory 
- add a few missing `--system` flags to conda config
- install default notebook config to /etc/jupyter instead of ~/.jupyter
- add a few missing `conda clean`s
 2017-05-02 13:26:35 +02:00
Peter Parente
6885115751 Bump spylon-kernel to 0.2.* 2017-03-08 22:40:34 -05:00
Peter Parente
fa77fe9957 Merge pull request #324 from parente/r-3.3.2 
Upgrade to r-base 3.3.2
 2017-01-12 13:13:51 -05:00
Marius van Niekerk
a58c3d7242 Version bump some more 2017-01-09 14:48:58 -05:00
Marius van Niekerk
21e8d8016a Version bump 2017-01-09 12:49:56 -05:00
Marius van Niekerk
8785f8b443 Pin spylon-kernel version 2017-01-09 11:44:18 -05:00
mariusvniekerk
e268ad01b3 Add spylon-kernel to all-spark 2017-01-06 16:42:42 -08:00
Peter Parente
012b408e73 Upgrade to r-base 3.3.2 
Remove pinning for plotting fix and upgrade other R packages
 2017-01-02 23:11:30 -05:00
Peter Parente
fff906003e Install Toree to conda env instead of user home 2016-12-31 15:24:30 -05:00
Peter Parente
52bce8f002 Use Apache Toree 0.2.0dev1 for Spark 2.0.2 2016-12-10 13:33:36 -05:00
Peter Parente
d762cb9790 Update to IRKernel 0.7 
Version 0.6 does not work after all containers rebuild
 2016-10-11 21:30:02 -05:00
Peter Parente
0d47f10af2 Workaround for R plotting regression 
Pin r-base to 3.3.1-1 (3.3.1-3 breaks it)
 2016-09-09 23:40:23 -04:00
Michael Poplavski
37bc11a05f Update R version to 3.3* 2016-07-13 11:36:54 -05:00
Sebastian Reuße
fdb247ec0c Make use of available environment variables 
base-notebook defines environment variables for the Conda install path and the
notebook user. However, in some instances, these locations were still hardcoded.
Let’s use the variables instead.
 2016-06-28 11:31:24 +02:00
Peter Parente
126009764f Disable pip cache during docker build 
Ref #188

(c) Copyright IBM Corp. 2016
 2016-05-29 23:09:48 -04:00