John Ramey
fd7a494cc5
Added the R tidyverse to datascience-notebook
2017-02-19 17:31:24 -06:00
Peter Parente
012b408e73
Upgrade to r-base 3.3.2
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Remove pinning for plotting fix and upgrade other R packages
2017-01-02 23:11:30 -05:00
Alan Du
4c3db22140
Precompile Julia packages
2016-11-17 17:26:01 +00:00
Alan Du
77669a9352
Fix Julia DL_LOAD_PATH
2016-11-17 17:26:01 +00:00
Alan Du
8974dbbe08
Upgrade Julia to v0.5
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This is pretty hacky -- we're using a Ubuntu 14.04 PPA to install
something on Debian Jessie -- but everything seems to work.
2016-11-17 17:26:01 +00:00
Peter Parente
d762cb9790
Update to IRKernel 0.7
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Version 0.6 does not work after all containers rebuild
2016-10-11 21:30:02 -05:00
Peter Parente
3e0eb813cb
Fix #269 , NB_UID regression
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Workaround docker / aufs permission problems
2016-10-11 21:29:15 -05:00
Peter Parente
0d47f10af2
Workaround for R plotting regression
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Pin r-base to 3.3.1-1 (3.3.1-3 breaks it)
2016-09-09 23:40:23 -04:00
Michael Poplavski
d7cdfd8691
Update R version to 3.3* in r-notebook and datascience-notebook
2016-07-14 10:36:10 -05:00
Peter Parente
dd0b2ed864
Merge pull request #227 from minrk/only-mv-julia
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Only move julia kernelspec
2016-06-28 12:01:01 -04:00
Min RK
d000a6b286
Only move julia kernelspec
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rather than all kernelspecs that might be in the user kernelspec dir
2016-06-28 16:37:34 +02:00
Sebastian Reuße
fdb247ec0c
Make use of available environment variables
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base-notebook defines environment variables for the Conda install path and the
notebook user. However, in some instances, these locations were still hardcoded.
Let’s use the variables instead.
2016-06-28 11:31:24 +02:00
Mladen Kolovic
5c2618f27a
Add HDF5 support for Julia
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* create `.juliarc.jl` start up script to point Julia to conda libraries, specifically the hdf5 libraries installed through the h5py package in the scipy stack
* add the HDF5 Julia package
Update README.md to document HDF5 addition
Add -F option to force config load
Add the -F flag to julia expression execution to load .juliarc.jl before execution.
2016-03-21 13:30:16 -04:00
Peter Parente
63d4015537
Rebase datascience-notebook on scipy-notebook
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Fixes #139
(c) Copyright IBM Corp. 2016
2016-03-13 23:16:01 -04:00
John Kirkham
af11fbc3c4
docker: Add and install from the r channel with conda.
2016-03-08 16:59:45 -05:00
John Kirkham
630ceec257
Dockerfile: Clean apt-get lists.
2016-03-07 21:38:40 -05:00
John Kirkham
a5cc245a7a
docker: Make conda installs quieter.
2016-03-06 21:13:57 -05:00
John Kirkham
5548f94b8d
datascience-notebook/Dockerfile: Clean out conda.
2016-03-04 18:29:32 -05:00
John Kirkham
61dc40b2c6
datascience-notebook/Dockerfile: Tell conda yes.
2016-03-04 17:33:07 -05:00
Peter Parente
e66ffa3141
Add libav-tools for matplotlib animation
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(c) Copyright IBM Corp. 2016
2016-02-26 08:43:01 -05:00
Fernando Perez
3eefa923fe
Update conda to py35/current, tini to 0.9.0 and add jed/emacs editors.
2016-02-12 21:22:42 -08:00
Fernando Perez
b8b0460d7a
Update package versions for both py2/py3and add h5py to base list.
2016-02-12 20:08:55 -08:00
Peter Parente
9aae44ef66
Use updated LICENSE.md file
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Also fix copyright headers on various files
2016-01-17 11:27:10 -05:00
Peter Parente
2988869079
Merge pull request #92 from parente/jovyan-by-default
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Make jovyan the default user for the docker cmd
2016-01-04 20:53:47 -05:00
Peter Parente
b7aeac87f4
Install libxrender1 to appease matplotlib
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Bite the bullet and preinstall it so that plotting libs that default
to using desktop rendering just work (matplotlib, ggplot, ...)
out of the box without having to get configuration right beforehand
(e.g., %matplotlib inline ahead of matplotlib import)
Only adds ~100k to the image size
(c) Copyright IBM Corp. 2015
2016-01-02 12:45:30 -05:00
Peter Parente
6d5cd67528
Make jovyan the default user for the docker cmd
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* Switch to jovyan at the end of every Dockerfile
* Document --user root requirement for NB_UID and GRANT_SUDO flags
(c) Copyright IBM Corp. 2015
2015-12-27 21:05:48 -05:00
Peter Parente
d8c83ec385
Bump r-irkernel to 0.5 to fix zmq issue
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Requires r-rmarkdown=0.8, r-devtools=1.9, r-tidyr=0.3 in r-notebook
(c) Copyright IBM Corp. 2015
2015-12-17 17:00:50 -05:00
Peter Parente
0a29b08d7c
Add rpy2
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Requires bump of devtools, tidyr, and rmarkdown too
(c) Copyright IBM Corp. 2015
2015-12-05 21:26:47 -05:00
Peter Parente
8b0d810878
Fix datascience-notebook build after pandas bump
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patsy, numba, bokeh all need upgrade to satisfy conda constraints
(c) Copyright IBM Corp. 2015
2015-12-04 22:36:51 -05:00
Justin Tyberg
e53b288e6e
Bump to pandas 0.17.
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(c) Copyright IBM Corp. 2015
2015-12-04 17:47:12 -05:00
Peter Parente
a388c4a66f
Add temporary rzmq workaround to other R stacks
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Required to rebuild now that a merge went in touching minimal
(c) Copyright IBM Corp. 2015
2015-10-24 22:40:59 -04:00
Peter Parente
678b64e9e4
Swap tini for supervisord
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* Pass $@ args to start-notebook.sh
* Set tini as entrypoint, but keep start-notebook.sh as easily overridable CMD
* su to jovyan user within start-notebook.sh script
Contribution (c) Copyright IBM Corp. 2015
2015-09-22 20:51:18 -04:00
Peter Parente
b6ecf61df2
Fix for issue #30 , missing ijulia
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Contribution (c) Copyright IBM Corp. 2015
2015-09-11 00:31:40 -04:00
Peter Parente
7c9edef43d
Fix missing install-self on py2 kernelspec
2015-08-30 21:56:48 -04:00
Peter Parente
701212dbf1
Explicitly set USER root in every Dockerfile
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Contribution (c) Copyright IBM Corp. 2015
2015-08-29 21:50:04 -04:00
Peter Parente
c4616560cf
Make subimages compatible with late user creation
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* Always remain as root during install
* Put kernel specs in system path, not user home
* Create user work directory at startup
* Note this is in 4.0 and up images, not 3.2
Contribution (c) Copyright IBM Corp. 2015
2015-08-28 23:43:57 -04:00
Peter Parente
ebb22200e6
Updates for Jupyter Notebook 4.0.x
2015-08-27 22:06:05 -04:00
nymoorland
008cc9d053
Add Julia
2015-08-27 21:57:04 -04:00
nymoorland
79169618d5
add a Jupyter data science notebook stack
2015-08-27 21:57:04 -04:00
