mirror of
https://github.com/jupyter/docker-stacks.git
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64 lines
1.5 KiB
Docker
64 lines
1.5 KiB
Docker
# Copyright (c) Jupyter Development Team.
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# Distributed under the terms of the Modified BSD License.
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ARG REGISTRY=quay.io
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ARG OWNER=jupyter
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ARG BASE_IMAGE=$REGISTRY/$OWNER/scipy-notebook
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FROM $BASE_IMAGE
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LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"
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# Fix: https://github.com/hadolint/hadolint/wiki/DL4006
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# Fix: https://github.com/koalaman/shellcheck/wiki/SC3014
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SHELL ["/bin/bash", "-o", "pipefail", "-c"]
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USER root
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# R pre-requisites
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RUN apt-get update --yes && \
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apt-get install --yes --no-install-recommends \
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fonts-dejavu \
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gfortran \
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gcc && \
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apt-get clean && rm -rf /var/lib/apt/lists/*
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# Julia dependencies
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# install Julia packages in /opt/julia instead of ${HOME}
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ENV JULIA_DEPOT_PATH=/opt/julia \
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JULIA_PKGDIR=/opt/julia
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# Setup Julia
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RUN /opt/setup-scripts/setup_julia.py
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USER ${NB_UID}
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# Setup IJulia kernel & other packages
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RUN /opt/setup-scripts/setup-julia-packages.bash
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# R packages including IRKernel which gets installed globally.
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# r-e1071: dependency of the caret R package
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RUN mamba install --yes \
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'r-base' \
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'r-caret' \
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'r-crayon' \
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'r-devtools' \
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'r-e1071' \
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'r-forecast' \
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'r-hexbin' \
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'r-htmltools' \
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'r-htmlwidgets' \
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'r-irkernel' \
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'r-nycflights13' \
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'r-randomforest' \
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'r-rcurl' \
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'r-rmarkdown' \
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'r-rodbc' \
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'r-rsqlite' \
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'r-shiny' \
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'r-tidymodels' \
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'r-tidyverse' \
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'rpy2' \
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'unixodbc' && \
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mamba clean --all -f -y && \
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fix-permissions "${CONDA_DIR}" && \
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fix-permissions "/home/${NB_USER}"
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