mirror of
https://github.com/jupyter/docker-stacks.git
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104 lines
2.6 KiB
Docker
104 lines
2.6 KiB
Docker
# Copyright (c) Jupyter Development Team.
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# Distributed under the terms of the Modified BSD License.
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FROM jupyter/minimal-notebook
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MAINTAINER Jupyter Project <jupyter@googlegroups.com>
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USER root
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# R pre-requisites
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RUN apt-get update && \
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apt-get install -y --no-install-recommends \
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fonts-dejavu \
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gfortran \
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gcc && apt-get clean
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# Julia dependencies
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RUN apt-get update && \
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apt-get install -y --no-install-recommends \
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julia \
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libnettle4 && apt-get clean
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USER jovyan
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# Install Python 3 packages
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RUN conda install --yes \
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'ipywidgets=4.0*' \
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'pandas=0.17*' \
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'matplotlib=1.4*' \
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'scipy=0.16*' \
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'seaborn=0.6*' \
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'scikit-learn=0.16*' \
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'scikit-image=0.11*' \
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'sympy=0.7*' \
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'cython=0.22*' \
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'patsy=0.4*' \
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'statsmodels=0.6*' \
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'cloudpickle=0.1*' \
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'dill=0.2*' \
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'numba=0.22*' \
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'bokeh=0.10*' \
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&& conda clean -yt
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# Install Python 2 packages
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RUN conda create -p $CONDA_DIR/envs/python2 python=2.7 \
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'ipython=4.0*' \
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'ipywidgets=4.0*' \
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'pandas=0.17*' \
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'matplotlib=1.4*' \
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'scipy=0.16*' \
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'seaborn=0.6*' \
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'scikit-learn=0.16*' \
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'scikit-image=0.11*' \
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'sympy=0.7*' \
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'cython=0.22*' \
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'patsy=0.4*' \
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'statsmodels=0.6*' \
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'cloudpickle=0.1*' \
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'dill=0.2*' \
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'numba=0.22*' \
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'bokeh=0.10*' \
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pyzmq \
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&& conda clean -yt
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# R packages including IRKernel which gets installed globally.
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RUN conda config --add channels r
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RUN conda install --yes \
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'rpy2=2.7*' \
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'r-base=3.2*' \
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'r-irkernel=0.5*' \
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'r-plyr=1.8*' \
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'r-devtools=1.9*' \
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'r-dplyr=0.4*' \
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'r-ggplot2=1.0*' \
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'r-tidyr=0.3*' \
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'r-shiny=0.12*' \
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'r-rmarkdown=0.8*' \
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'r-forecast=5.8*' \
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'r-stringr=0.6*' \
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'r-rsqlite=1.0*' \
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'r-reshape2=1.4*' \
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'r-nycflights13=0.1*' \
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'r-caret=6.0*' \
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'r-rcurl=1.95*' \
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'r-randomforest=4.6*' && conda clean -yt
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# Install IJulia packages as jovyan and then move the kernelspec out
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# to the system share location. Avoids problems with runtime UID change not
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# taking effect properly on the .local folder in the jovyan home dir.
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RUN julia -e 'Pkg.add("IJulia")' && \
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mv /home/$NB_USER/.local/share/jupyter/kernels/* $CONDA_DIR/share/jupyter/kernels/ && \
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chmod -R go+rx $CONDA_DIR/share/jupyter && \
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rm -rf /home/$NB_USER/.local/share
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RUN julia -e 'Pkg.add("Gadfly")' && julia -e 'Pkg.add("RDatasets")'
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USER root
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# Install Python 2 kernel spec globally to avoid permission problems when NB_UID
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# switching at runtime.
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RUN $CONDA_DIR/envs/python2/bin/python \
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$CONDA_DIR/envs/python2/bin/ipython \
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kernelspec install-self
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USER jovyan
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