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Merge pull request #166 from mkolovic/add-hdf5-julia

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Add hdf5 julia support to datascience stack
This commit is contained in:
jakirkham
2016-03-21 19:54:57 -04:00
parent 258e25c03c 5c2618f27a
commit 9f4ed032ba
2 changed files with 6 additions and 2 deletions
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6
datascience-notebook/Dockerfile
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@@ -52,4 +52,8 @@ RUN julia -e 'Pkg.add("IJulia")' && \
mv /home/$NB_USER/.local/share/jupyter/kernels/* $CONDA_DIR/share/jupyter/kernels/ && \
chmod -R go+rx $CONDA_DIR/share/jupyter && \
rm -rf /home/$NB_USER/.local/share
RUN julia -e 'Pkg.add("Gadfly")' && julia -e 'Pkg.add("RDatasets")'
# Show Julia where conda libraries are
# Add essential packages
RUN echo 'push!(Sys.DL_LOAD_PATH, "/opt/conda/lib")' > /home/$NB_USER/.juliarc.jl && \
julia -e 'Pkg.add("Gadfly")' && julia -e 'Pkg.add("RDatasets")' && julia -F -e 'Pkg.add("HDF5")'

2
datascience-notebook/README.md
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@@ -9,7 +9,7 @@
* pandas, matplotlib, scipy, seaborn, scikit-learn, scikit-image, sympy, cython, patsy, statsmodel, cloudpickle, dill, numba, bokeh pre-installed
* Conda R v3.2.x and channel
* plyr, devtools, dplyr, ggplot2, tidyr, shiny, rmarkdown, forecast, stringr, rsqlite, reshape2, nycflights13, caret, rcurl, and randomforest pre-installed
* Julia v0.3.x with Gadfly and RDatasets pre-installed
* Julia v0.3.x with Gadfly, RDatasets and HDF5 pre-installed
* Unprivileged user `jovyan` (uid=1000, configurable, see options) in group `users` (gid=100) with ownership over `/home/jovyan` and `/opt/conda`
* [tini](https://github.com/krallin/tini) as the container entrypoint and [start-notebook.sh](../minimal-notebook/start-notebook.sh) as the default command
* Options for HTTPS, password auth, and passwordless `sudo`