Merge pull request #973 from mathematicalmichael/patch-1

instructions for python 3.x kernels with conda
This commit is contained in:
Peter Parente
2020-01-19 23:42:38 -05:00
committed by GitHub

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@@ -98,6 +98,47 @@ USER $NB_USER
Ref:
[https://github.com/jupyter/docker-stacks/issues/440](https://github.com/jupyter/docker-stacks/issues/440)
## Add a Python 3.x environment
The default version of Python that ships with conda/ubuntu may not be the version you want.
To add a conda environment with a different version and make it accessible to Jupyter, the instructions are very similar to Python 2.x but are slightly simpler (no need to switch to `root`):
```
# Choose your desired base image
FROM jupyter/minimal-notebook:latest
# name your environment and choose python 3.x version
ARG conda_env=python36
ARG py_ver=3.6
# you can add additional libraries you want conda to install by listing them below the first line and ending with "&& \"
RUN conda env create --quiet --yes -p $CONDA_DIR/envs/$conda_env python=$py_ver ipython ipykernel && \
conda clean --all -f -y
# alternatively, you can comment out the lines above and uncomment those below
# if you'd prefer to use a YAML file present in the docker build context
# COPY environment.yml /home/$NB_USER/tmp/
# RUN cd /home/$NB_USER/tmp/ && \
# conda env create -p $CONDA_DIR/envs/$conda_env -f environment.yml && \
# conda clean --all -f -y
# create Python 3.x environment and link it to jupyter
RUN $CONDA_DIR/envs/${conda_env}/bin/python -m ipykernel install --user --name=${conda_env} && \
fix-permissions $CONDA_DIR && \
fix-permissions /home/$NB_USER
# any additional pip installs can be added by uncommenting the following line
# RUN $CONDA_DIR/envs/${conda_env}/bin/pip install
# prepend conda environment to path
ENV PATH $CONDA_DIR/envs/${conda_env}/bin:$PATH
# if you want this environment to be the default one, uncomment the following line:
# ENV CONDA_DEFAULT_ENV ${conda_env}
```
## Run JupyterLab
JupyterLab is preinstalled as a notebook extension starting in tag