Merge remote-tracking branch 'upstream/master'

This commit is contained in:
“Romain
2019-03-08 11:21:51 +01:00
3 changed files with 20 additions and 17 deletions

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@@ -60,16 +60,18 @@ RUN mkdir /home/$NB_USER/work && \
fix-permissions /home/$NB_USER
# Install conda as jovyan and check the md5 sum provided on the download site
ENV MINICONDA_VERSION 4.5.11
ENV MINICONDA_VERSION=4.5.12 \
CONDA_VERSION=4.6.7
RUN cd /tmp && \
wget --quiet https://repo.continuum.io/miniconda/Miniconda3-${MINICONDA_VERSION}-Linux-x86_64.sh && \
echo "e1045ee415162f944b6aebfe560b8fee *Miniconda3-${MINICONDA_VERSION}-Linux-x86_64.sh" | md5sum -c - && \
echo "866ae9dff53ad0874e1d1a60b1ad1ef8 *Miniconda3-${MINICONDA_VERSION}-Linux-x86_64.sh" | md5sum -c - && \
/bin/bash Miniconda3-${MINICONDA_VERSION}-Linux-x86_64.sh -f -b -p $CONDA_DIR && \
rm Miniconda3-${MINICONDA_VERSION}-Linux-x86_64.sh && \
$CONDA_DIR/bin/conda config --system --prepend channels conda-forge && \
$CONDA_DIR/bin/conda config --system --set auto_update_conda false && \
$CONDA_DIR/bin/conda config --system --set show_channel_urls true && \
$CONDA_DIR/bin/conda install --quiet --yes conda="${MINICONDA_VERSION%.*}.*" && \
$CONDA_DIR/bin/conda install --quiet --yes conda="${CONDA_VERSION%.*}.*" && \
$CONDA_DIR/bin/conda update --all --quiet --yes && \
conda clean -tipsy && \
rm -rf /home/$NB_USER/.cache/yarn && \
@@ -90,7 +92,7 @@ RUN conda install --quiet --yes 'tini=0.18.0' && \
# Do all this in a single RUN command to avoid duplicating all of the
# files across image layers when the permissions change
RUN conda install --quiet --yes \
'notebook=5.7.2' \
'notebook=5.7.5' \
'jupyterhub=0.9.4' \
'jupyterlab=0.35.4' && \
conda clean -tipsy && \

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@@ -102,7 +102,7 @@ if [ $(id -u) == 0 ] ; then
# the environment preserved
run-hooks /usr/local/bin/before-notebook.d
echo "Executing the command: ${cmd[@]}"
exec sudo -E -H -u $NB_USER PATH=$PATH XDG_CACHE_HOME=/home/$NB_USER/.cache PYTHONPATH=$PYTHONPATH "${cmd[@]}"
exec sudo -E -H -u $NB_USER PATH=$PATH XDG_CACHE_HOME=/home/$NB_USER/.cache PYTHONPATH=${PYTHONPATH:-} "${cmd[@]}"
else
if [[ "$NB_UID" == "$(id -u jovyan)" && "$NB_GID" == "$(id -g jovyan)" ]]; then
# User is not attempting to override user/group via environment

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@@ -20,27 +20,28 @@ USER $NB_UID
RUN conda install --quiet --yes \
'conda-forge::blas=*=openblas' \
'ipywidgets=7.4*' \
'pandas=0.23*' \
'pandas=0.24*' \
'numexpr=2.6*' \
'matplotlib=2.2*' \
'scipy=1.1*' \
'matplotlib=3.0*' \
'scipy=1.2*' \
'seaborn=0.9*' \
'scikit-learn=0.20*' \
'scikit-image=0.14*' \
'sympy=1.1*' \
'cython=0.28*' \
'sympy=1.3*' \
'cython=0.29*' \
'patsy=0.5*' \
'statsmodels=0.9*' \
'cloudpickle=0.5*' \
'cloudpickle=0.8*' \
'dill=0.2*' \
'numba=0.38*' \
'bokeh=0.13*' \
'sqlalchemy=1.2*' \
'dask=1.1.*' \
'numba=0.42*' \
'bokeh=1.0*' \
'sqlalchemy=1.3*' \
'hdf5=1.10*' \
'h5py=2.7*' \
'h5py=2.9*' \
'vincent=0.4.*' \
'beautifulsoup4=4.6.*' \
'protobuf=3.*' \
'beautifulsoup4=4.7.*' \
'protobuf=3.7.*' \
'xlrd' && \
conda remove --quiet --yes --force qt pyqt && \
conda clean -tipsy && \