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docker-stacks/r-notebook/README.md
Peter Parente e1c0c75c9c Upgrade to Jupyter Notebook 
* Change minimal-notebook to install notebook=4.0*
* Change other Dockerfile to point to 4.0 Docker Hub tag (to be built)
* Change config and pem file paths for jupyter
* Install ipywidgets in all containers that have a Python stack
* Update all READMEs to describe v3.2 and v4.0 since Docker Hub only shows one README for all tags

Contribution (c) Copyright IBM Corp. 2015
2015-08-23 08:55:09 -04:00

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Jupyter Notebook R Stack

What it Gives You

  • Jupyter Notebook server (v4.0.x or v3.2.x, see tag)
  • Conda R v3.2.x and channel
  • plyr, devtools, dplyr, ggplot2, tidyr, shiny, rmarkdown, forecast, stringr, rsqlite, reshape2, nycflights13, caret, rcurl, and randomforest pre-installed
  • Options for HTTPS, password auth, and passwordless sudo

Basic Use

The following command starts a container with the Notebook server listening for HTTP connections on port 8888 without authentication configured.

docker run -d -p 8888:8888 jupyter/r-notebook

Options

You may customize the execution of the Docker container and the Notebook server it contains with the following optional arguments.

  • -e PASSWORD="YOURPASS" - Configures Jupyter Notebook to require the given password. Should be conbined with USE_HTTPS on untrusted networks.
  • -e USE_HTTPS=yes - Configures Jupyter Notebook to accept encrypted HTTPS connections. If a pem file containing a SSL certificate and key is not found in /home/jovyan/.ipython/profile_default/security/notebook.pem, the container will generate a self-signed certificate for you.
  • -e GRANT_SUDO=yes - Gives the jovyan user passwordless sudo capability. Useful for installing OS packages. You should only enable sudo if you trust the user or if the container is running on an isolated host.
  • -v /some/host/folder/for/work:/home/jovyan/work - Host mounts the default working directory on the host to preserve work even when the container is destroyed and recreated (e.g., during an upgrade).
  • (v3.2.x) -v /some/host/folder/for/server.pem:/home/jovyan/.ipython/profile_default/security/notebook.pem - Mounts a SSL certificate plus key for USE_HTTPS. Useful if you have a real certificate for the domain under which you are running the Notebook server.
  • (v4.0.x) -v /some/host/folder/for/server.pem:/home/jovyan/.local/share/jupyter/notebook.pem - Mounts a SSL certificate plus key for USE_HTTPS. Useful if you have a real certificate for the domain under which you are running the Notebook server.
  • -e INTERFACE=10.10.10.10 - Configures Jupyter Notebook to listen on the given interface. Defaults to '*', all interfaces, which is appropriate when running using default bridged Docker networking. When using Docker's --net=host, you may wish to use this option to specify a particular network interface.
  • -e PORT=8888 - Configures Jupyter Notebook to listen on the given port. Defaults to 8888, which is the port exposed within the Dockerfile for the image. When using Docker's --net=host, you may wish to use this option to specify a particular port.